Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | PLIM_RS07510 | Not Available | + | 1863375 - 1864703 | 48246.5 |
| ppc domain-containing protein | PLIM_RS07515 | Not Available | + | 1865244 - 1867706 | 88675.9 |
| duf1549 and duf1553 domain-containing protein | PLIM_RS07520 | Not Available | + | 1867869 - 1870319 | 91826.1 |
| c-type cytochrome domain-containing protein | PLIM_RS07525 | Not Available | + | 1870441 - 1872711 | 81674.9 |
| class i sam-dependent methyltransferase | PLIM_RS07530 | P70976 | + | 1872893 - 1873711 | 30737.4 |
| hypothetical protein | PLIM_RS22630 | Not Available | + | 1873974 - 1874465 | 16954.3 |
| diguanylate cyclase domain-containing protein | PLIM_RS07540 | Not Available | - | 1874640 - 1875494 | 32067.2 |
| orotate phosphoribosyltransferase | PLIM_RS07545 | Q7UYX5 | + | 1875938 - 1876495 | 19708.9 |
| hypothetical protein | PLIM_RS07550 | Not Available | - | 1876532 - 1879822 | 120051.0 |
| rna polymerase sigma factor | PLIM_RS22635 | Not Available | + | 1880276 - 1880977 | 26080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.