Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS07455 | Not Available | + | 1848285 - 1849787 | 55409.6 |
| crispr-associated endonuclease cas2 | PLIM_RS07465 | Not Available | - | 1851638 - 1851967 | 12527.3 |
| crispr-associated endonuclease cas4/cas1 | PLIM_RS07470 | Q74H36 | - | 1851967 - 1853763 | 66837.9 |
| nad(p)h-binding protein | PLIM_RS07475 | P75822 | - | 1854064 - 1855047 | 35660.2 |
| duf1990 family protein | PLIM_RS07480 | Q9RST8 | + | 1855162 - 1855797 | 23776.4 |
| hypothetical protein | PLIM_RS07485 | Not Available | + | 1856139 - 1859132 | 107563.0 |
| hypothetical protein | PLIM_RS07490 | Not Available | + | 1859275 - 1859895 | 23496.1 |
| Trna-arg | Not Available | Not Available | + | 1860446 - 1860519 | Not Available |
| hypothetical protein | PLIM_RS07500 | Not Available | - | 1860597 - 1861589 | 35857.1 |
| zinc-dependent peptidase | PLIM_RS07505 | A7FJD3 | - | 1861853 - 1862728 | 33685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.