Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS07390 | Not Available | + | 1832401 - 1832919 | 19119.0 |
| deoxyribodipyrimidine photo-lyase | PLIM_RS07395 | P58818 | + | 1833151 - 1834632 | 56205.9 |
| chloride channel protein | PLIM_RS07400 | Q8RXR2 | - | 1834638 - 1836407 | 62925.2 |
| yqge/algh family protein | PLIM_RS07410 | Q3AQ69 | + | 1836733 - 1837299 | 20667.5 |
| pmoa family protein | PLIM_RS07420 | Not Available | + | 1837625 - 1838623 | 37385.9 |
| alpha/beta hydrolase | PLIM_RS07425 | Not Available | + | 1839047 - 1839931 | 32156.1 |
| duf309 domain-containing protein | PLIM_RS22625 | Not Available | + | 1840161 - 1840742 | 21795.0 |
| pvc-type heme-binding cxxch protein | PLIM_RS07435 | Not Available | - | 1840833 - 1844009 | 117358.0 |
| sialate o-acetylesterase | PLIM_RS07445 | Not Available | + | 1844474 - 1845730 | 46470.3 |
| c-type cytochrome | PLIM_RS07450 | Not Available | + | 1845887 - 1848277 | 88500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.