Planctopirus limnophila DSM 3776

Gram-negativeCocciMotileAerobe

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Planctopirus

Description

Planctopirus limnophila DSM 3776 is a Gram-negative, nonsporulating coccus that thrives in aquatic environments and exhibits aerobic metabolism. This microbe's spherical shape is characteristic of many cocci, contributing to its identification within its ecological niche. As an aerobe, Planctopirus limnophila requires oxygen for survival and growth, indicating its adaptation to oxygen-rich habitats typically found in freshwater systems. The presence of this organism in aquatic ecosystems suggests it may play a role in biogeochemical cycles, potentially influencing nutrient availability and microbial community dynamics. Given its specific habitat and metabolic requirements, Planctopirus limnophila may interact closely with other microorganisms in its environment, possibly contributing to processes such as organic matter decomposition or nutrient cycling. Understanding the ecological roles of microbes like Planctopirus limnophila is crucial for comprehending the complexities of aquatic ecosystems and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusPlanctopirus
SpeciesPlanctopirus limnophila
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Planctopirus limnophila DSM 3776
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planctopirus limnophila DSM 3776

Accession NumberNC_014149.1

Gene Summary

Adenine Count

8422 bp

Thymine Count

7481 bp

Guanine Count

10628 bp

Cytosine Count

10479 bp

Genome Length

37010 bp

Protein-coding Genes

48 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
moxr family atpasePLIM_RS07335Not Available+1819200 - 182023738221.0
duf58 domain-containing proteinPLIM_RS07340Not Available+1820279 - 182118734988.1
formylmethanofuran dehydrogenase subunit cPLIM_RS22620Not Available-1821191 - 182206631608.8
hypothetical proteinPLIM_RS07355Not Available+1822351 - 182345742290.5
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolasePLIM_RS07360Q7UKJ8-1823477 - 182505457593.6
dcap family trimeric outer membrane transporterPLIM_RS07365Not Available-1825537 - 182721961711.2
aspartate kinasePLIM_RS07370Q59229-1827607 - 182940664475.6
methionine biosynthesis protein metwPLIM_RS07375Q7UG04-1829556 - 183024525430.1
homoserine o-acetyltransferasePLIM_RS07380C4XNQ9-1830242 - 183145343933.3
voc family proteinPLIM_RS07385Not Available+1832020 - 183235512349.4

Displaying genes 1421 – 1430 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites