Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| moxr family atpase | PLIM_RS07335 | Not Available | + | 1819200 - 1820237 | 38221.0 |
| duf58 domain-containing protein | PLIM_RS07340 | Not Available | + | 1820279 - 1821187 | 34988.1 |
| formylmethanofuran dehydrogenase subunit c | PLIM_RS22620 | Not Available | - | 1821191 - 1822066 | 31608.8 |
| hypothetical protein | PLIM_RS07355 | Not Available | + | 1822351 - 1823457 | 42290.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PLIM_RS07360 | Q7UKJ8 | - | 1823477 - 1825054 | 57593.6 |
| dcap family trimeric outer membrane transporter | PLIM_RS07365 | Not Available | - | 1825537 - 1827219 | 61711.2 |
| aspartate kinase | PLIM_RS07370 | Q59229 | - | 1827607 - 1829406 | 64475.6 |
| methionine biosynthesis protein metw | PLIM_RS07375 | Q7UG04 | - | 1829556 - 1830245 | 25430.1 |
| homoserine o-acetyltransferase | PLIM_RS07380 | C4XNQ9 | - | 1830242 - 1831453 | 43933.3 |
| voc family protein | PLIM_RS07385 | Not Available | + | 1832020 - 1832355 | 12349.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.