Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase family protein | PLIM_RS07235 | Not Available | - | 1780005 - 1780496 | 17651.5 |
| fist n-terminal domain-containing protein | PLIM_RS07240 | P9WKS6 | - | 1780540 - 1781724 | 42067.2 |
| hypothetical protein | PLIM_RS07245 | Not Available | - | 1781836 - 1782663 | 29894.6 |
| signal peptide peptidase sppa | PLIM_RS07250 | Q9C9C0 | + | 1783249 - 1785198 | 69846.7 |
| abc transporter substrate-binding protein | PLIM_RS07255 | P42061 | + | 1785362 - 1787962 | 96887.0 |
| abc transporter permease | PLIM_RS07260 | P42062 | + | 1788040 - 1789092 | 39431.0 |
| abc transporter permease | PLIM_RS22615 | P42063 | + | 1789092 - 1790822 | 63370.5 |
| biosynthetic-type acetolactate synthase large subunit | PLIM_RS07270 | P27819 | + | 1791217 - 1792998 | 65032.4 |
| hypothetical protein | PLIM_RS07275 | Not Available | + | 1793375 - 1796662 | 120681.0 |
| tetratricopeptide repeat protein | PLIM_RS07280 | Not Available | - | 1796754 - 1799033 | 85353.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.