Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS07180 | Not Available | - | 1771328 - 1771513 | 6798.39 |
| stas domain-containing protein | PLIM_RS07190 | Not Available | - | 1771726 - 1772184 | 16380.5 |
| flagellar biosynthesis protein flhb | PLIM_RS07195 | P35538 | - | 1772407 - 1773489 | 39998.7 |
| trka family potassium uptake protein | PLIM_RS07200 | P39760 | - | 1773624 - 1774307 | 24481.8 |
| putative signal transducing protein | PLIM_RS07205 | Not Available | + | 1774541 - 1774855 | 11760.1 |
| hypothetical protein | PLIM_RS07210 | Not Available | + | 1774943 - 1775350 | 14785.4 |
| aspartate ammonia-lyase | PLIM_RS07215 | Q9HTD7 | + | 1775492 - 1776928 | 52278.3 |
| atp-binding cassette domain-containing protein | PLIM_RS07220 | Not Available | + | 1777020 - 1778015 | 37928.2 |
| hypothetical protein | PLIM_RS07225 | Not Available | + | 1778048 - 1778845 | 30451.0 |
| family 16 glycosylhydrolase | PLIM_RS07230 | P23903 | - | 1778889 - 1779875 | 36716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.