Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS00405 | Not Available | + | 105982 - 108105 | 76673.4 |
| isocitrate/isopropylmalate dehydrogenase family protein | PLIM_RS00410 | O29610 | + | 108465 - 109634 | 42167.9 |
| regulatory iron-sulfur-containing complex subunit rict | PLIM_RS00415 | P37541 | + | 109944 - 110912 | 36756.3 |
| nicotinate-nucleotide adenylyltransferase | PLIM_RS00420 | B9KYU7 | + | 110971 - 111582 | 22920.2 |
| gspe/pule family protein | PLIM_RS00425 | P31703 | + | 111846 - 113648 | 65641.9 |
| cvpa family protein | PLIM_RS00430 | Not Available | + | 113736 - 114410 | 24392.8 |
| hypothetical protein | PLIM_RS00435 | Not Available | + | 114747 - 115634 | 32334.4 |
| hypothetical protein | PLIM_RS22130 | Not Available | - | 115693 - 116130 | 15319.2 |
| duf1559 domain-containing protein | PLIM_RS00445 | Not Available | - | 116372 - 117409 | 36687.2 |
| Trna-val | Not Available | Not Available | + | 118033 - 118106 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.