Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s1c family serine protease | PLIM_RS07130 | Not Available | + | 1758280 - 1759767 | 52855.9 |
| mekhla domain-containing protein | PLIM_RS07135 | Not Available | + | 1759810 - 1760313 | 19194.4 |
| s-methyl-5-thioribose-1-phosphate isomerase | PLIM_RS07140 | Q2RKL8 | - | 1760350 - 1761438 | 38763.7 |
| thua domain-containing protein | PLIM_RS07145 | Not Available | + | 1761694 - 1762584 | 33094.3 |
| methyltransferase | PLIM_RS07150 | O14118 | - | 1762732 - 1763481 | 27943.3 |
| atp-dependent rna helicase hrpa | PLIM_RS07155 | P43329 | + | 1763673 - 1767590 | 148618.0 |
| rhomboid family intramembrane serine protease | PLIM_RS22610 | Q8Z229 | + | 1767623 - 1768504 | 32603.6 |
| uracil-dna glycosylase | PLIM_RS07165 | Q9CC91 | + | 1768515 - 1769225 | 26449.7 |
| had family hydrolase | PLIM_RS07170 | Not Available | - | 1769234 - 1770067 | 30846.2 |
| rok family protein | PLIM_RS07175 | P0A4E1 | + | 1770164 - 1771120 | 33440.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.