Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase, t2ss/t4p/t4ss family | PLIM_RS07060 | Q1D098 | - | 1742263 - 1743600 | 48342.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PLIM_RS07065 | A5GD89 | - | 1743771 - 1744661 | 31627.7 |
| nad(p)-binding domain-containing protein | PLIM_RS07070 | Q9SZE1 | - | 1744834 - 1745769 | 32494.4 |
| glsb/yeaq/ymge family stress response membrane protein | PLIM_RS07080 | Not Available | + | 1746139 - 1746525 | 13429.6 |
| rubisco large subunit c-terminal-like domain-containing protein | PLIM_RS22605 | Q93UZ0 | + | 1746657 - 1748411 | 62934.7 |
| primosomal protein n' | PLIM_RS07090 | P94461 | + | 1748477 - 1750783 | 85376.1 |
| hypothetical protein | PLIM_RS07095 | Not Available | - | 1750855 - 1751199 | 12797.2 |
| m42 family metallopeptidase | PLIM_RS07100 | P94521 | + | 1751709 - 1752773 | 38335.1 |
| exodeoxyribonuclease v subunit beta | PLIM_RS07115 | B2A610 | + | 1752869 - 1756549 | 138410.0 |
| hypothetical protein | PLIM_RS07120 | Not Available | - | 1756835 - 1757194 | 12232.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.