Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | PLIM_RS07010 | Not Available | - | 1731797 - 1733077 | 45832.8 |
| Trna-met | Not Available | Not Available | + | 1733215 - 1733287 | Not Available |
| hypothetical protein | PLIM_RS07020 | Not Available | - | 1733341 - 1733751 | 15815.8 |
| duf1559 domain-containing protein | PLIM_RS07025 | Not Available | - | 1733929 - 1734903 | 35049.6 |
| hypothetical protein | PLIM_RS07030 | Not Available | - | 1735078 - 1736136 | 39556.4 |
| hypothetical protein | PLIM_RS07035 | Not Available | + | 1736795 - 1737433 | 24604.7 |
| signal peptidase ii | PLIM_RS07040 | C0QGT5 | - | 1737560 - 1738126 | 20233.1 |
| para family protein | PLIM_RS07045 | O83296 | - | 1738195 - 1739013 | 29663.8 |
| fdhf/ydep family oxidoreductase | PLIM_RS07050 | P9WJP8 | - | 1739165 - 1741345 | 80158.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | PLIM_RS07055 | Q14197 | + | 1741719 - 1742174 | 17486.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.