Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | PLIM_RS06960 | Q2YNM0 | + | 1719918 - 1722911 | 107598.0 |
| biotin/lipoyl-containing protein | PLIM_RS06965 | Not Available | + | 1723093 - 1723380 | 10096.0 |
| atp-binding protein | PLIM_RS22600 | P28631 | + | 1723395 - 1724492 | 40525.1 |
| sdr family oxidoreductase | PLIM_RS06975 | O57314 | + | 1724685 - 1725500 | 29859.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | PLIM_RS06980 | B4S674 | - | 1725561 - 1726598 | 37356.4 |
| hypothetical protein | PLIM_RS06985 | Not Available | + | 1727117 - 1727401 | 10594.5 |
| tagaturonate epimerase family protein | PLIM_RS06990 | Q9WYS1 | - | 1727429 - 1728694 | 46266.0 |
| ldh family oxidoreductase | PLIM_RS06995 | P16142 | - | 1728798 - 1729859 | 37055.6 |
| nucleoside triphosphate pyrophosphohydrolase | PLIM_RS07000 | P44723 | - | 1730058 - 1731020 | 36332.0 |
| hypothetical protein | PLIM_RS07005 | Not Available | + | 1731185 - 1731745 | 20824.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.