Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | PLIM_RS06905 | Q7URC7 | - | 1706682 - 1708664 | 73839.4 |
| ribosome silencing factor | PLIM_RS06910 | P73658 | - | 1708752 - 1709186 | 16343.6 |
| mbl fold metallo-hydrolase | PLIM_RS06920 | Q5SLP1 | + | 1709694 - 1711091 | 51692.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | PLIM_RS06925 | Q8KG38 | - | 1711188 - 1713050 | 68305.9 |
| nad-dependent epimerase/dehydratase family protein | PLIM_RS06930 | Q57664 | - | 1713221 - 1714189 | 34632.3 |
| hypothetical protein | PLIM_RS24365 | Not Available | + | 1714668 - 1714829 | 5594.35 |
| hypothetical protein | PLIM_RS06940 | Not Available | + | 1714917 - 1715255 | 12611.9 |
| atp-binding protein | PLIM_RS22595 | P48027 | - | 1715293 - 1717704 | 88661.5 |
| trna guanosine(34) transglycosylase tgt | PLIM_RS06950 | Q7UWK9 | + | 1718014 - 1719132 | 40832.5 |
| preprotein translocase subunit yajc | PLIM_RS06955 | Not Available | + | 1719309 - 1719680 | 13448.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.