Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit d | PLIM_RS06860 | B3QY45 | - | 1697482 - 1698732 | 46252.2 |
| nadh-quinone oxidoreductase subunit c | PLIM_RS06865 | B7J7U3 | - | 1698796 - 1699335 | 20526.5 |
| nadh-quinone oxidoreductase subunit a | PLIM_RS22585 | Q3ASW8 | - | 1699366 - 1699911 | 20052.2 |
| dmt family protein | PLIM_RS24990 | Not Available | - | 1700088 - 1700138 | 1990.34 |
| dmt family protein | PLIM_RS24995 | Not Available | - | 1700264 - 1700641 | 14347.1 |
| 4fe-4s binding protein | PLIM_RS06880 | Not Available | - | 1700958 - 1701488 | 19934.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PLIM_RS06885 | Q7UMZ2 | + | 1701748 - 1702773 | 36542.1 |
| nucleoside 2-deoxyribosyltransferase | PLIM_RS22590 | Not Available | - | 1702763 - 1703581 | 30043.3 |
| duf2079 domain-containing protein | PLIM_RS06895 | Not Available | + | 1703748 - 1706105 | 88058.8 |
| hypothetical protein | PLIM_RS06900 | Not Available | + | 1706148 - 1706663 | 17869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.