Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaminase a | PLIM_RS06810 | Q8YSZ5 | + | 1685348 - 1686343 | 36300.1 |
| 2-phosphosulfolactate phosphatase | PLIM_RS06815 | A4XFZ6 | + | 1686415 - 1687161 | 26923.5 |
| iron-sulfur cluster assembly scaffold protein | PLIM_RS06820 | O32163 | + | 1687360 - 1687788 | 15919.1 |
| aminotransferase class v-fold plp-dependent enzyme | PLIM_RS06825 | O32164 | + | 1687882 - 1689201 | 48083.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | PLIM_RS06830 | Q87KE1 | + | 1689448 - 1689945 | 17593.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | PLIM_RS06835 | P12045 | + | 1689942 - 1691105 | 41753.2 |
| error-prone dna polymerase | PLIM_RS06840 | Q7UXK9 | - | 1691142 - 1694222 | 116130.0 |
| dna polymerase y family protein | PLIM_RS06845 | Not Available | - | 1694225 - 1695760 | 58681.8 |
| imua family protein | PLIM_RS22580 | Not Available | - | 1695675 - 1696433 | 27847.5 |
| sos response-associated peptidase | PLIM_RS06855 | O31916 | + | 1696551 - 1697225 | 25470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.