Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | PLIM_RS06665 | Q7UKG6 | + | 1649148 - 1649672 | 19086.2 |
| thioredoxin family protein | PLIM_RS06670 | Not Available | + | 1649811 - 1650392 | 20737.8 |
| radical sam protein | PLIM_RS06675 | Not Available | + | 1650545 - 1651420 | 32629.1 |
| duf3488 and transglutaminase-like domain-containing protein | PLIM_RS06680 | Q9HZX3 | + | 1651777 - 1654188 | 90044.0 |
| type ii secretion system f family protein | PLIM_RS06685 | P22609 | - | 1654226 - 1655251 | 36226.7 |
| cytochrome c | PLIM_RS06690 | Not Available | + | 1655446 - 1656231 | 28137.7 |
| glutamyl-trna reductase | PLIM_RS06695 | Q7UKZ2 | - | 1656503 - 1657780 | 48050.8 |
| cytochrome c biogenesis protein ccsa | PLIM_RS06700 | Not Available | - | 1657777 - 1658673 | 32015.7 |
| pin/tram domain-containing protein | PLIM_RS06705 | Q92F41 | - | 1658809 - 1659849 | 38171.1 |
| hypothetical protein | PLIM_RS24360 | Not Available | + | 1659925 - 1660065 | 5368.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.