Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | PLIM_RS06615 | Not Available | - | 1637294 - 1638253 | 36197.5 |
| hypothetical protein | PLIM_RS24095 | Not Available | + | 1638328 - 1638516 | 7010.79 |
| glycosyltransferase | PLIM_RS06625 | Q65CC7 | + | 1638585 - 1639703 | 41961.6 |
| trar/dksa c4-type zinc finger protein | PLIM_RS06630 | Not Available | + | 1640083 - 1640541 | 17199.1 |
| gfo/idh/moca family oxidoreductase | PLIM_RS06635 | Not Available | + | 1640915 - 1642309 | 52175.1 |
| hypothetical protein | PLIM_RS06640 | Not Available | + | 1642602 - 1643219 | 22565.9 |
| formaldehyde-activating enzyme | PLIM_RS06645 | Q9FA38 | - | 1643413 - 1643910 | 17478.2 |
| xylose isomerase | PLIM_RS06650 | Q7UVG2 | - | 1644407 - 1645720 | 48815.9 |
| hypothetical protein | PLIM_RS06655 | Not Available | - | 1645936 - 1647774 | 69507.0 |
| hypothetical protein | PLIM_RS06660 | Not Available | + | 1648247 - 1649116 | 32292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.