Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS06565 | Not Available | - | 1625857 - 1626147 | 10808.6 |
| l-aspartate oxidase | PLIM_RS06570 | Q8ZMX9 | - | 1626236 - 1627873 | 59944.4 |
| hu family dna-binding protein | PLIM_RS06575 | A0K5M4 | + | 1628219 - 1628734 | 18426.0 |
| hypothetical protein | PLIM_RS06580 | Not Available | + | 1629102 - 1629323 | 8310.14 |
| hypothetical protein | PLIM_RS06585 | Not Available | + | 1629743 - 1630231 | 17637.1 |
| prenyltransferase/squalene oxidase repeat-containing protein | PLIM_RS06590 | Not Available | + | 1630206 - 1631348 | 42218.5 |
| hypothetical protein | PLIM_RS06595 | Not Available | + | 1631360 - 1632670 | 48841.4 |
| hypothetical protein | PLIM_RS06600 | Not Available | + | 1632754 - 1634628 | 71016.5 |
| cvpa family protein | PLIM_RS06605 | Not Available | - | 1634691 - 1635935 | 45143.9 |
| metal-dependent hydrolase | PLIM_RS22565 | Not Available | - | 1636101 - 1637081 | 35599.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.