Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS06505 | Not Available | + | 1609883 - 1610377 | 18485.4 |
| hypothetical protein | PLIM_RS06510 | Not Available | + | 1610622 - 1611260 | 22816.2 |
| dead/deah box helicase | PLIM_RS06515 | P9WH04 | - | 1611391 - 1613217 | 67480.0 |
| duf1501 domain-containing protein | PLIM_RS06525 | Not Available | + | 1614105 - 1615511 | 51171.6 |
| wd40 repeat domain-containing protein | PLIM_RS06530 | Not Available | - | 1615592 - 1616725 | 40752.4 |
| amidophosphoribosyltransferase | PLIM_RS06540 | O26742 | + | 1617520 - 1619127 | 59649.8 |
| dna polymerase iii subunit alpha | PLIM_RS06545 | Q9XDH5 | + | 1619359 - 1622889 | 131124.0 |
| glycosyltransferase | PLIM_RS22560 | Q58459 | - | 1622946 - 1624136 | 44092.8 |
| fkbm family methyltransferase | PLIM_RS06555 | Not Available | - | 1624133 - 1624900 | 28712.5 |
| ydei family protein | PLIM_RS06560 | Not Available | - | 1625159 - 1625824 | 24959.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.