Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | PLIM_RS06445 | Q796Y8 | - | 1599773 - 1600363 | 21002.2 |
| tgf-beta receptor type i/ii extracellular region | PLIM_RS06450 | O01840 | - | 1600461 - 1602002 | 57928.5 |
| srpbcc family protein | PLIM_RS06460 | Not Available | - | 1602417 - 1603088 | 24474.4 |
| hypothetical protein | PLIM_RS06465 | Not Available | - | 1603147 - 1603485 | 13003.4 |
| sugar phosphate isomerase/epimerase family protein | PLIM_RS06470 | Q9WYP7 | - | 1603598 - 1604422 | 29589.4 |
| phosphoglycerate kinase | PLIM_RS06475 | Q7UEX1 | - | 1604637 - 1605839 | 42407.2 |
| gamma carbonic anhydrase family protein | PLIM_RS06480 | Q9FWR5 | + | 1606009 - 1606581 | 20671.6 |
| duf4332 domain-containing protein | PLIM_RS06485 | Not Available | + | 1606707 - 1608371 | 61346.9 |
| rna polymerase sigma factor | PLIM_RS06495 | Not Available | + | 1608812 - 1609399 | 22289.8 |
| hypothetical protein | PLIM_RS06500 | Not Available | + | 1609396 - 1609767 | 13684.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.