Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | PLIM_RS06395 | Not Available | + | 1588268 - 1588735 | 17811.6 |
| translational gtpase typa | PLIM_RS06400 | P72749 | - | 1588818 - 1590653 | 67684.2 |
| (5-formylfuran-3-yl)methyl phosphate synthase | PLIM_RS06405 | Not Available | + | 1591086 - 1591871 | 28755.5 |
| had family phosphatase | PLIM_RS06410 | Not Available | + | 1592061 - 1593062 | 37822.5 |
| hypothetical protein | PLIM_RS06415 | Not Available | - | 1593261 - 1593572 | 11291.4 |
| hypothetical protein | PLIM_RS06420 | Not Available | - | 1593710 - 1593952 | 9133.44 |
| trypsin-like peptidase domain-containing protein | PLIM_RS06425 | Q2YMX6 | + | 1593951 - 1595312 | 49229.9 |
| thiamine-phosphate kinase | PLIM_RS06430 | Q7UPP0 | + | 1595506 - 1596447 | 33777.5 |
| dead/deah box helicase | PLIM_RS06435 | B9DFG3 | + | 1596486 - 1599029 | 95788.2 |
| 5-formyltetrahydrofolate cyclo-ligase | PLIM_RS06440 | Q8L539 | + | 1599048 - 1599686 | 24174.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.