Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | PLIM_RS06345 | B9KB95 | + | 1570568 - 1571824 | 45662.3 |
| hypothetical protein | PLIM_RS22550 | Not Available | - | 1571862 - 1572281 | 15380.7 |
| dna helicase recq | PLIM_RS06355 | P15043 | + | 1572687 - 1574972 | 85141.0 |
| hsp20/alpha crystallin family protein | PLIM_RS22555 | Not Available | + | 1575252 - 1575746 | 18181.5 |
| efflux rnd transporter periplasmic adaptor subunit | PLIM_RS06365 | C9XVZ5 | + | 1576158 - 1577438 | 47154.7 |
| multidrug efflux rnd transporter permease subunit | PLIM_RS06370 | Q668C6 | + | 1577585 - 1580740 | 114732.0 |
| multidrug efflux rnd transporter permease subunit | PLIM_RS06375 | B1LNW5 | + | 1580737 - 1583868 | 112714.0 |
| serine/threonine-protein kinase | PLIM_RS06380 | A0QNG1 | + | 1584062 - 1584955 | 34099.4 |
| atp-dependent helicase | PLIM_RS06385 | P56255 | + | 1585086 - 1587128 | 77330.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | PLIM_RS06390 | O05516 | + | 1587125 - 1587820 | 24857.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.