Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS06305 | Not Available | - | 1559627 - 1559860 | 9128.06 |
| restriction endonuclease subunit s | PLIM_RS22545 | P06991 | - | 1559863 - 1561725 | 69820.5 |
| class i sam-dependent dna methyltransferase | PLIM_RS06315 | Q60297 | - | 1561722 - 1563323 | 59881.5 |
| helix-turn-helix domain-containing protein | PLIM_RS24090 | Not Available | + | 1564785 - 1565186 | 14775.5 |
| hypothetical protein | PLIM_RS06325 | Not Available | + | 1565282 - 1565503 | 8369.27 |
| helix-turn-helix domain-containing protein | PLIM_RS24980 | Not Available | + | 1565469 - 1565720 | 9334.0 |
| dmt family protein | PLIM_RS24985 | Not Available | + | 1566886 - 1567344 | 17372.9 |
| Trna-arg | Not Available | Not Available | + | 1567647 - 1567720 | Not Available |
| duf2256 domain-containing protein | PLIM_RS23630 | Not Available | + | 1567930 - 1568109 | 7081.44 |
| tlpa disulfide reductase family protein | PLIM_RS06340 | Not Available | + | 1568420 - 1570459 | 74455.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.