Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | PLIM_RS06210 | Not Available | - | 1535304 - 1535921 | 23205.9 |
| l-lactate dehydrogenase | PLIM_RS06215 | B9LZ61 | + | 1536421 - 1537362 | 33480.7 |
| opro/oprp family phosphate-selective porin | PLIM_RS06220 | Not Available | + | 1537737 - 1539206 | 55217.6 |
| hypothetical protein | PLIM_RS06225 | Not Available | + | 1539469 - 1542399 | 109587.0 |
| hypothetical protein | PLIM_RS06230 | Not Available | + | 1542579 - 1544219 | 60673.7 |
| gfo/idh/moca family oxidoreductase | PLIM_RS06235 | Not Available | - | 1544496 - 1545803 | 48067.2 |
| sugar phosphate isomerase/epimerase | PLIM_RS06240 | Not Available | + | 1546076 - 1547005 | 33586.9 |
| omph family outer membrane protein | PLIM_RS06245 | Not Available | + | 1547239 - 1547934 | 24483.5 |
| duf11 domain-containing protein | PLIM_RS06250 | Not Available | + | 1548361 - 1550214 | 64466.9 |
| hnh endonuclease | PLIM_RS06255 | Not Available | - | 1550382 - 1550978 | 22940.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.