Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase small subunit | PLIM_RS06155 | O28555 | + | 1525897 - 1526442 | 20160.8 |
| ketol-acid reductoisomerase | PLIM_RS06165 | Q7UKY0 | + | 1526827 - 1527831 | 36669.1 |
| m50 family metallopeptidase | PLIM_RS06170 | Not Available | - | 1527952 - 1528443 | 18369.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | PLIM_RS06175 | Q3A949 | - | 1528476 - 1529954 | 51918.9 |
| serine protease | PLIM_RS06180 | Not Available | - | 1530115 - 1530909 | 29471.4 |
| yhch/yjgk/yial family protein | PLIM_RS06185 | Not Available | - | 1531273 - 1531755 | 18057.3 |
| hypothetical protein | PLIM_RS06190 | Not Available | - | 1531855 - 1532043 | 7053.66 |
| marr family winged helix-turn-helix transcriptional regulator | PLIM_RS06195 | Not Available | - | 1532131 - 1532592 | 17637.3 |
| glucose-6-phosphate dehydrogenase | PLIM_RS06200 | P48848 | + | 1533211 - 1534779 | 59097.2 |
| hypothetical protein | PLIM_RS06205 | Not Available | + | 1534858 - 1535199 | 12360.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.