Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | PLIM_RS00305 | Not Available | - | 75855 - 76781 | 33542.3 |
| duf2752 domain-containing protein | PLIM_RS00310 | Not Available | - | 77070 - 77762 | 26089.4 |
| hypothetical protein | PLIM_RS24490 | Not Available | - | 77702 - 77932 | 8263.34 |
| nickel pincer cofactor biosynthesis protein larb | PLIM_RS00315 | F9UST0 | - | 77932 - 78786 | 29989.0 |
| 6-phosphofructokinase | PLIM_RS00320 | Q59126 | - | 78961 - 79995 | 36497.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | PLIM_RS00325 | P49787 | - | 80113 - 81459 | 49623.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | PLIM_RS00330 | P37799 | - | 81744 - 82247 | 17287.6 |
| xaa-pro peptidase family protein | PLIM_RS00335 | P76524 | - | 82469 - 83659 | 43127.8 |
| mmpl family transporter | PLIM_RS00340 | O54101 | - | 83756 - 86404 | 95770.4 |
| atp-dependent zinc metalloprotease ftsh | PLIM_RS00345 | D2QZ34 | - | 86633 - 88777 | 77588.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.