Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | PLIM_RS06105 | Q87AD2 | - | 1513645 - 1514517 | 30390.4 |
| rhodanese-like domain-containing protein | PLIM_RS06110 | Q3JRV4 | - | 1514547 - 1515977 | 51205.8 |
| rhodanese-like domain-containing protein | PLIM_RS06115 | P73801 | - | 1516080 - 1516664 | 20633.2 |
| site-specific tyrosine recombinase xerd | PLIM_RS06120 | P46352 | + | 1517044 - 1517991 | 35492.1 |
| hypothetical protein | PLIM_RS06125 | Not Available | - | 1518062 - 1519429 | 51446.1 |
| 5'/3'-nucleotidase sure | PLIM_RS06130 | Q7UKT6 | + | 1520230 - 1521042 | 29656.2 |
| cation diffusion facilitator family transporter | PLIM_RS06135 | P96610 | + | 1521047 - 1522015 | 35128.4 |
| l-fuconate dehydratase | PLIM_RS06140 | Q6INX4 | - | 1522053 - 1523348 | 47915.8 |
| diadenylate cyclase | PLIM_RS22540 | Not Available | - | 1523401 - 1524762 | 49143.2 |
| hypothetical protein | PLIM_RS06150 | Not Available | + | 1525118 - 1525480 | 13772.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.