Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS06050 | Not Available | + | 1501218 - 1502978 | 62342.3 |
| (2fe-2s)-binding protein | PLIM_RS06055 | Not Available | + | 1503111 - 1503440 | 11625.6 |
| hypothetical protein | PLIM_RS24080 | Not Available | + | 1503761 - 1504132 | 13786.3 |
| hsp20/alpha crystallin family protein | PLIM_RS06060 | Not Available | - | 1504436 - 1504855 | 15748.9 |
| hsp20/alpha crystallin family protein | PLIM_RS22535 | Not Available | - | 1504845 - 1505402 | 20585.7 |
| universal stress protein | PLIM_RS06075 | Not Available | + | 1505796 - 1506431 | 22840.5 |
| zinc ribbon domain-containing protein | PLIM_RS06085 | Not Available | + | 1506745 - 1509378 | 91677.1 |
| hypothetical protein | PLIM_RS06090 | Not Available | + | 1509637 - 1510125 | 18417.6 |
| thioredoxin domain-containing protein | PLIM_RS06095 | P37512 | + | 1510229 - 1512352 | 78844.4 |
| methyltransferase domain-containing protein | PLIM_RS06100 | Not Available | - | 1512391 - 1513584 | 42717.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.