Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-loop ntpase | PLIM_RS05895 | G3XD64 | + | 1449409 - 1450368 | 34840.4 |
| hypothetical protein | PLIM_RS24075 | Not Available | + | 1450800 - 1451057 | 9172.24 |
| flia/whig family rna polymerase sigma factor | PLIM_RS05905 | P17211 | + | 1451167 - 1451946 | 29824.9 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | PLIM_RS05910 | Q728P4 | + | 1452182 - 1453615 | 52367.9 |
| Trna-lys | Not Available | Not Available | + | 1453613 - 1453685 | Not Available |
| sdr family nad(p)-dependent oxidoreductase | PLIM_RS05920 | Q6TMA3 | - | 1454077 - 1454886 | 28594.2 |
| duf6793 family protein | PLIM_RS05925 | Not Available | - | 1454962 - 1455285 | 11999.3 |
| prenyltransferase/squalene oxidase repeat-containing protein | PLIM_RS05930 | Not Available | - | 1455470 - 1456969 | 54326.7 |
| methyltransferase | PLIM_RS05935 | B4XY98 | - | 1457183 - 1458268 | 39225.1 |
| alkaline phosphatase family protein | PLIM_RS05940 | Not Available | - | 1458337 - 1459722 | 51500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.