Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | PLIM_RS05785 | Not Available | - | 1419878 - 1420522 | 23708.5 |
| hypothetical protein | PLIM_RS05790 | Not Available | - | 1420690 - 1421040 | 13465.0 |
| duf1549 domain-containing protein | PLIM_RS05795 | Not Available | + | 1421227 - 1423728 | 93172.9 |
| duf1501 domain-containing protein | PLIM_RS05800 | Not Available | + | 1423815 - 1425272 | 53882.6 |
| hypothetical protein | PLIM_RS05805 | Not Available | - | 1427113 - 1427481 | 13658.3 |
| signal peptidase i | PLIM_RS05815 | Not Available | + | 1428042 - 1429907 | 70095.5 |
| lps export abc transporter atp-binding protein | PLIM_RS05820 | P45073 | + | 1430008 - 1430796 | 29189.2 |
| ftsw/roda/spove family cell cycle protein | PLIM_RS05825 | P07373 | + | 1430865 - 1432007 | 41599.0 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS05830 | P27785 | + | 1432377 - 1433321 | 35232.4 |
| hypothetical protein | PLIM_RS05835 | Not Available | - | 1433525 - 1434475 | 35123.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.