Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | PLIM_RS22520 | P72943 | - | 1407509 - 1409773 | 82510.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | PLIM_RS05735 | Q3MAV9 | - | 1409770 - 1411095 | 47091.3 |
| tigr01777 family oxidoreductase | PLIM_RS05745 | Q17QH8 | + | 1411531 - 1412472 | 34162.4 |
| aarf/abc1/ubib kinase family protein | PLIM_RS05750 | P73627 | - | 1412516 - 1414345 | 68333.5 |
| iron-sulfur cluster assembly accessory protein | PLIM_RS05755 | Not Available | + | 1414617 - 1415111 | 18592.3 |
| s1 rna-binding domain protein | PLIM_RS05760 | Not Available | + | 1415858 - 1416130 | 10191.4 |
| hypothetical protein | PLIM_RS05765 | Not Available | - | 1416140 - 1416442 | 10717.2 |
| hlyd family secretion protein | PLIM_RS05770 | Not Available | - | 1416871 - 1417914 | 37850.5 |
| abc transporter atp-binding protein | PLIM_RS05775 | O31711 | - | 1417959 - 1418654 | 24336.7 |
| abc transporter permease | PLIM_RS05780 | Not Available | - | 1418684 - 1419820 | 41645.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.