Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1580 domain-containing protein | PLIM_RS24975 | Not Available | + | 1396361 - 1396708 | 13805.9 |
| hypothetical protein | PLIM_RS05685 | Not Available | + | 1397400 - 1400825 | 129287.0 |
| response regulator | PLIM_RS05690 | Not Available | + | 1400822 - 1401286 | 17997.7 |
| response regulator | PLIM_RS05695 | Not Available | + | 1401283 - 1402518 | 45300.1 |
| hypothetical protein | PLIM_RS05700 | Not Available | + | 1402704 - 1403072 | 13975.4 |
| hypothetical protein | PLIM_RS05705 | Not Available | - | 1403149 - 1403619 | 18325.2 |
| recombinase family protein | PLIM_RS05710 | Not Available | - | 1404147 - 1405241 | 40918.1 |
| dmt family protein | PLIM_RS24705 | Not Available | + | 1405296 - 1405808 | 18944.5 |
| site-specific integrase | PLIM_RS05720 | Not Available | - | 1405982 - 1407220 | 46809.6 |
| Trna-arg | Not Available | Not Available | + | 1407343 - 1407416 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.