Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | PLIM_RS05535 | Q5SI82 | + | 1361869 - 1362855 | 36880.6 |
| s8 family peptidase | PLIM_RS05540 | Not Available | + | 1362874 - 1365351 | 91842.4 |
| hypothetical protein | PLIM_RS05545 | Not Available | + | 1365769 - 1366668 | 34376.9 |
| dead/deah box helicase | PLIM_RS05550 | Not Available | - | 1366825 - 1369002 | 81762.1 |
| atp-binding protein | PLIM_RS05555 | Not Available | - | 1368999 - 1370339 | 49876.3 |
| terb n-terminal domain-containing protein | PLIM_RS05560 | Not Available | - | 1370336 - 1372543 | 82368.9 |
| aaa domain-containing protein | PLIM_RS05565 | Not Available | - | 1373113 - 1376523 | 127759.0 |
| hypothetical protein | PLIM_RS05575 | Not Available | + | 1378006 - 1379370 | 50132.1 |
| duf2167 domain-containing protein | PLIM_RS05580 | Not Available | + | 1379538 - 1380545 | 36720.7 |
| hypothetical protein | PLIM_RS05585 | Not Available | + | 1381044 - 1381733 | 25375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.