Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| toll/interleukin-1 receptor domain-containing protein | PLIM_RS05485 | Not Available | + | 1347924 - 1348655 | 25704.6 |
| hypothetical protein | PLIM_RS24695 | Not Available | - | 1348713 - 1349372 | 25066.3 |
| hypothetical protein | PLIM_RS24700 | Not Available | - | 1349490 - 1350104 | 23105.3 |
| dead/deah box helicase | PLIM_RS05495 | Q8TL39 | - | 1350445 - 1353543 | 113563.0 |
| hachiman antiphage defense system protein hama | PLIM_RS05500 | Not Available | - | 1353533 - 1354354 | 30593.4 |
| hypothetical protein | PLIM_RS05505 | Not Available | - | 1354706 - 1355929 | 45795.8 |
| sir2 family protein | PLIM_RS05510 | Not Available | - | 1356124 - 1357860 | 63891.0 |
| ardc family protein | PLIM_RS05520 | Not Available | + | 1359148 - 1359843 | 25513.3 |
| transposase | PLIM_RS05525 | Not Available | + | 1360561 - 1360782 | 8446.07 |
| is5 family transposase | PLIM_RS05530 | Not Available | + | 1360736 - 1361179 | 16550.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.