Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | PLIM_RS05415 | Not Available | - | 1325407 - 1332750 | 265114.0 |
| dmt family protein | PLIM_RS24970 | Not Available | - | 1332775 - 1333602 | 28832.4 |
| glycosyltransferase | PLIM_RS22470 | Not Available | - | 1333676 - 1335589 | 71739.6 |
| hypothetical protein | PLIM_RS24355 | Not Available | + | 1335946 - 1336464 | 18342.0 |
| glycosyltransferase | PLIM_RS22480 | P42460 | - | 1337283 - 1340771 | 131220.0 |
| glycosyltransferase | PLIM_RS22485 | Not Available | - | 1340768 - 1342420 | 61668.4 |
| hypothetical protein | PLIM_RS05460 | Not Available | - | 1342417 - 1343346 | 35359.7 |
| aaa family atpase | PLIM_RS05465 | O31673 | - | 1343577 - 1345472 | 70418.2 |
| transposase | PLIM_RS22490 | Not Available | + | 1346416 - 1347039 | 22264.6 |
| hypothetical protein | PLIM_RS24055 | Not Available | + | 1347029 - 1347568 | 19939.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.