Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS05360 | Not Available | + | 1311623 - 1312597 | 35786.5 |
| glycosyltransferase family 25 protein | PLIM_RS05365 | Not Available | + | 1312724 - 1316092 | 126940.0 |
| gdp-l-fucose synthase | PLIM_RS05370 | O49213 | + | 1316210 - 1317166 | 35521.2 |
| glycosyltransferase family 10 domain-containing protein | PLIM_RS05375 | O30511 | + | 1317489 - 1318451 | 37150.1 |
| is3 family transposase | PLIM_RS05380 | P35878 | - | 1318589 - 1319185 | 22781.1 |
| is3 family transposase | PLIM_RS23915 | Not Available | - | 1319222 - 1319455 | 8966.6 |
| transposase | PLIM_RS24965 | Not Available | - | 1319452 - 1319760 | 11667.2 |
| rhs repeat domain-containing protein | PLIM_RS05395 | Not Available | - | 1320086 - 1322641 | 93970.8 |
| is4 family transposase | PLIM_RS05400 | Not Available | - | 1322968 - 1324461 | 55553.5 |
| hypothetical protein | PLIM_RS05410 | Not Available | - | 1324740 - 1325378 | 23927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.