Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homing endonuclease associated repeat-containing protein | PLIM_RS05240 | Not Available | - | 1282200 - 1283048 | 32047.5 |
| isoprenylcysteine carboxylmethyltransferase family protein | PLIM_RS05245 | P94139 | - | 1283216 - 1283896 | 26004.0 |
| m56 family metallopeptidase | PLIM_RS05250 | Not Available | - | 1284004 - 1285143 | 43537.8 |
| blai/meci/copy family transcriptional regulator | PLIM_RS05255 | Not Available | - | 1285140 - 1285511 | 13944.2 |
| duf1559 domain-containing protein | PLIM_RS05260 | Not Available | - | 1285701 - 1286459 | 27786.0 |
| duf1559 domain-containing protein | PLIM_RS22460 | Not Available | - | 1286791 - 1289097 | 83648.5 |
| rnd family transporter | PLIM_RS05275 | Not Available | - | 1289580 - 1291868 | 82764.9 |
| duf6580 family putative transport protein | PLIM_RS05285 | Not Available | + | 1292876 - 1293436 | 20551.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | PLIM_RS05290 | A9B732 | + | 1293440 - 1294501 | 37746.6 |
| adenosylcobinamide-gdp ribazoletransferase | PLIM_RS05295 | B2UAJ1 | + | 1294768 - 1295604 | 29656.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.