Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sumf1/egtb/pvdo family nonheme iron enzyme | PLIM_RS05170 | Not Available | + | 1270050 - 1271525 | 53724.5 |
| formylglycine-generating enzyme family protein | PLIM_RS05175 | Q8NBK3 | + | 1272004 - 1272900 | 33277.0 |
| duf6714 family protein | PLIM_RS05185 | Not Available | - | 1273204 - 1273719 | 19581.5 |
| hypothetical protein | PLIM_RS24050 | Not Available | - | 1274011 - 1274883 | 31586.5 |
| hypothetical protein | PLIM_RS05205 | Not Available | - | 1275530 - 1276582 | 39813.1 |
| duf2971 domain-containing protein | PLIM_RS05210 | Not Available | - | 1276682 - 1277488 | 30943.8 |
| serine protease | PLIM_RS05215 | O43464 | - | 1277763 - 1278860 | 40155.1 |
| alpha/beta hydrolase | PLIM_RS05220 | Not Available | - | 1278861 - 1279850 | 35784.3 |
| isoaspartyl peptidase/l-asparaginase family protein | PLIM_RS05230 | Q7CQV5 | - | 1280180 - 1281277 | 39233.8 |
| hypothetical protein | PLIM_RS05235 | Not Available | - | 1281648 - 1281989 | 13265.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.