Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS05070 | Not Available | + | 1246978 - 1247421 | 15451.3 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS05075 | Not Available | + | 1248149 - 1248766 | 23079.0 |
| wd40 repeat domain-containing serine/threonine protein kinase | PLIM_RS22455 | Not Available | + | 1248769 - 1251297 | 90235.8 |
| Trna-val | Not Available | Not Available | + | 1251445 - 1251518 | Not Available |
| tyrosine-type recombinase/integrase | PLIM_RS24955 | Not Available | - | 1251478 - 1252551 | 40585.8 |
| hypothetical protein | PLIM_RS24045 | Not Available | + | 1252478 - 1252783 | 10730.6 |
| duf3987 domain-containing protein | PLIM_RS05100 | Not Available | - | 1253111 - 1255711 | 95683.1 |
| hypothetical protein | PLIM_RS05105 | Not Available | - | 1255708 - 1256226 | 19855.4 |
| helix-turn-helix domain-containing protein | PLIM_RS05110 | Not Available | - | 1256288 - 1256500 | 7749.57 |
| hypothetical protein | PLIM_RS05115 | Not Available | - | 1256490 - 1256684 | 6868.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.