Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | PLIM_RS00205 | Not Available | - | 51133 - 52110 | 35302.7 |
| thiol-disulfide oxidoreductase dcc family protein | PLIM_RS00210 | P40761 | - | 52268 - 52759 | 17883.6 |
| hypothetical protein | PLIM_RS22100 | Not Available | + | 53215 - 54561 | 49440.3 |
| 3'-5' exonuclease | PLIM_RS00220 | Not Available | - | 54779 - 55657 | 33306.6 |
| bpss1187 family protein | PLIM_RS00225 | Not Available | + | 55775 - 56941 | 43280.3 |
| duf3419 family protein | PLIM_RS00230 | Not Available | - | 57212 - 58414 | 46058.3 |
| udp-2,3-diacylglucosamine diphosphatase | PLIM_RS22105 | Not Available | - | 58465 - 59676 | 45135.0 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | PLIM_RS00240 | Not Available | - | 59974 - 60768 | 29134.5 |
| duf1080 domain-containing protein | PLIM_RS00245 | Not Available | + | 61141 - 62496 | 49504.4 |
| 3-dehydroquinate synthase | PLIM_RS00250 | A4J3A3 | - | 62730 - 63854 | 39969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.