Kosmotoga olearia TBF 19.5.1

Gram-negativeRodMotileanaerobic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Kosmotogales

Family

Kosmotogaceae

Genus

Kosmotoga

Description

Kosmotoga olearia (strain TBF 19.5.1) is a Gram-negative bacterium isolated from an oil deposit and has a broad temperature growth range, so it is useful for comparative structural biology of thermophilic and mesophilic proteins as well as learning about oil deposit ecosystems. It has the characteristic morphology of one or more cells contained in a sheath-like envelope which extends beyond the cell wall. (EBI Integr8)

Taxonomy

Kingdom	Thermotogati
Phylum	Thermotogota
Class	Thermotogae
Order	Kosmotogales
Family	Kosmotogaceae
Genus	Kosmotoga
Species	Kosmotoga olearia
Strain	TBF 19.5.1

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	anaerobic
Optimal temperature	45
Temperature range	Mesophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	non-spore-forming
Energy source	Not Available
Pathogenicity	No

Genome Summary

Kosmotoga olearia TBF 19.5.1

Gene Summary

Adenine Count

666146 bp

Thymine Count

679539 bp

Guanine Count

480879 bp

Cytosine Count

475562 bp

Genome Length

2302126 bp

Protein-coding Genes

2131 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

Name	Locus Tag	UniProt	Strand	Coordinates	Molecular Weight
isoleucine--trna ligase	KOLE_RS00060	Not Available	+	11010 - 13775	106295.0
slbb domain-containing protein	KOLE_RS00065	Not Available	+	13900 - 17469	129792.0
tyrosine-protein phosphatase	KOLE_RS00070	Not Available	+	17518 - 18198	26322.9
gumc family protein	KOLE_RS00075	Not Available	+	18232 - 20457	84217.1
zip family metal transporter	KOLE_RS00080	Not Available	+	20454 - 21197	26172.8
o-antigen ligase family protein	KOLE_RS00085	Not Available	+	21224 - 24001	106644.0
methionine--trna ligase	KOLE_RS00090	Not Available	+	24055 - 25998	74597.1
dna gyrase subunit a	KOLE_RS00095	Not Available	+	26015 - 28453	90489.9
transcriptional repressor lexa	KOLE_RS00100	Not Available	+	28473 - 29099	23527.7
ribose 5-phosphate isomerase b	KOLE_RS00105	Not Available	+	29117 - 29578	16978.4

Displaying genes 11 – 20 of 2186 in total

Pathways

23 pathways

1,6-Anhydro-N-acetylmuramic Acid Recycling pathway thumbnail

1,6-Anhydro-N-acetylmuramic Acid Recycling

1,6-Anhydro-N-acetylmuramic Acid Recycling

Show All 23 Pathways

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000217	alpha-ribazoleC14H18N2O4		Not available	Average278.3037Da Monoisotopic278.126657074Da
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P		Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4		Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5		Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6		Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000428	3-oxoadipateC6H6O5		Not available	Average158.11Da Monoisotopic158.022620453Da
BASm0000592	(S)-1-phenylethanolC8H10O		Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000989	GlycerolC3H8O3		`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da
BASm0001225	dodecanoateC12H23O2		Not available	Average199.3098Da Monoisotopic199.169805Da
BASm0001639	CobinamideC48H72CoN11O8		`13497-85-3`	Average990.0874Da Monoisotopic989.4897335Da

Displaying 1–10 of 769 metabolites