Agathobacter rectalis ATCC 33656

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis ATCC 33656 is a Gram-positive, rod-shaped bacterium that functions as a chemoheterotroph and thrives in anaerobic environments, with an optimal growth temperature of 37.0°C. As a nonsporulating organism, A. rectalis is adapted to host-associated habitats, suggesting a close relationship with its host, potentially within the gastrointestinal tract. The anaerobic nature of A. rectalis indicates its metabolic processes are optimized for environments devoid of oxygen, which is characteristic of many gut-associated microorganisms. This adaptation allows A. rectalis to play a role in the complex microbial community of the gut, where it may contribute to the fermentation of dietary fibers and other substrates, subsequently impacting host health and metabolism. The presence of A. rectalis in the gut microbiota underscores its potential role in maintaining gut homeostasis and influencing host immune responses. Further insights into its metabolic pathways and interactions with other microbial species could elucidate its contributions to gut health and disease states. Given its specific habitat and energy requirements, A. rectalis may serve as a model organism for studying anaerobic metabolism and microbial ecology in host-associated environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis ATCC 33656
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis ATCC 33656

Accession NumberNC_012781.1

Gene Summary

Adenine Count

1003856 bp

Thymine Count

1014859 bp

Guanine Count

707254 bp

Cytosine Count

723716 bp

Genome Length

3449685 bp

Protein-coding Genes

3212 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
winged helix-turn-helix domain-containing proteinEUBREC_RS00595Not Available+121783 - 12207611507.9
aaa family atpaseEUBREC_RS00600Not Available+122180 - 12376960790.8
hypothetical proteinEUBREC_RS17635Not Available+123818 - 1239645649.75
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgEUBREC_RS18255Not Available+123961 - 1241928688.08
helix-turn-helix transcriptional regulatorEUBREC_RS00610Not Available-124373 - 12520332104.7
carbohydrate abc transporter substrate-binding proteinEUBREC_RS00615Not Available+125441 - 12678748937.7
carbohydrate abc transporter permeaseEUBREC_RS00620Not Available+126896 - 12778032777.1
carbohydrate abc transporter permeaseEUBREC_RS00625Not Available+127792 - 12868233171.6
duf6903 family proteinEUBREC_RS00630Not Available+128700 - 1289037606.98
1,3-beta-galactosyl-n-acetylhexosamine phosphorylaseEUBREC_RS00635Not Available+128935 - 13110083548.5

Displaying genes 241 – 250 of 3363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites