Agathobacter rectalis ATCC 33656

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis ATCC 33656 is a Gram-positive, rod-shaped bacterium that functions as a chemoheterotroph and thrives in anaerobic environments, with an optimal growth temperature of 37.0°C. As a nonsporulating organism, A. rectalis is adapted to host-associated habitats, suggesting a close relationship with its host, potentially within the gastrointestinal tract. The anaerobic nature of A. rectalis indicates its metabolic processes are optimized for environments devoid of oxygen, which is characteristic of many gut-associated microorganisms. This adaptation allows A. rectalis to play a role in the complex microbial community of the gut, where it may contribute to the fermentation of dietary fibers and other substrates, subsequently impacting host health and metabolism. The presence of A. rectalis in the gut microbiota underscores its potential role in maintaining gut homeostasis and influencing host immune responses. Further insights into its metabolic pathways and interactions with other microbial species could elucidate its contributions to gut health and disease states. Given its specific habitat and energy requirements, A. rectalis may serve as a model organism for studying anaerobic metabolism and microbial ecology in host-associated environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis ATCC 33656
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis ATCC 33656

Accession NumberNC_012781.1

Gene Summary

Adenine Count

1003856 bp

Thymine Count

1014859 bp

Guanine Count

707254 bp

Cytosine Count

723716 bp

Genome Length

3449685 bp

Protein-coding Genes

3212 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
spova/spovaeb family sporulation membrane proteinEUBREC_RS05005Not Available-1031647 - 103210816459.2
serine hydroxymethyltransferaseEUBREC_RS05010Not Available+1032378 - 103361945137.2
serine--trna ligaseEUBREC_RS05015Not Available+1033675 - 103496448994.0
type ii toxin-antitoxin system hica family toxinEUBREC_RS05020Not Available+1035209 - 10354669760.82
type ii toxin-antitoxin system hicb family antitoxinEUBREC_RS05025Not Available+1035450 - 103581513788.3
hypothetical proteinEUBREC_RS17915Not Available+1035843 - 10359684857.71
yitt family proteinEUBREC_RS05030Not Available-1035974 - 103681931077.0
phosphoribosylformylglycinamidine cyclo-ligaseEUBREC_RS05035Not Available+1037121 - 103814636350.1
phosphoribosylglycinamide formyltransferaseEUBREC_RS05040Not Available+1038197 - 103882322669.5
phosphoribosylamine--glycine ligaseEUBREC_RS05045Not Available+1038919 - 104019346062.1

Displaying genes 1141 – 1150 of 3363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites