Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility protein | N824_12960 | Not Available | - | 424340 - 425929 | 59645.8 |
| hypothetical protein | N824_12965 | Not Available | + | 426141 - 427319 | 42638.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | N824_12970 | Not Available | + | 427346 - 427822 | 17339.2 |
| quercetin 2,3-dioxygenase | N824_12975 | Not Available | - | 427833 - 428708 | 32258.3 |
| hypothetical protein | N824_12980 | Not Available | - | 428749 - 429279 | 18979.2 |
| cyclic nucleotide-binding protein | N824_12985 | Not Available | - | 429368 - 429964 | 22815.8 |
| hypothetical protein | N824_12990 | Not Available | - | 429974 - 430132 | 5638.05 |
| hypothetical protein | N824_12995 | Not Available | - | 430183 - 431370 | 45463.0 |
| hypothetical protein | N824_13000 | Not Available | - | 431373 - 432206 | 31952.1 |
| carboxylate-amine ligase | N824_13005 | Not Available | - | 432203 - 433306 | 42254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.