Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_16045 | Not Available | + | 1138832 - 1139299 | 17341.4 |
| hypothetical protein | N824_16050 | Not Available | + | 1139292 - 1139444 | 5810.06 |
| hypothetical protein | N824_16055 | Not Available | - | 1139609 - 1139926 | 11838.0 |
| hypothetical protein | N824_16060 | Not Available | - | 1139938 - 1140873 | 35230.1 |
| hypothetical protein | N824_16065 | Not Available | - | 1140875 - 1141900 | 39203.3 |
| hypothetical protein | N824_16070 | Not Available | - | 1141904 - 1142080 | 6540.61 |
| hypothetical protein | N824_16075 | Not Available | + | 1142861 - 1143385 | 19484.9 |
| hypothetical protein | N824_16080 | Not Available | + | 1143378 - 1144067 | 25568.1 |
| hypothetical protein | N824_16085 | Not Available | + | 1144257 - 1146398 | 81463.9 |
| biotin carboxylase | N824_16090 | Not Available | + | 1146398 - 1147711 | 49967.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.