Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15895 | Not Available | + | 1106411 - 1107691 | 49974.6 |
| bactoprenol glucosyl transferase | N824_15900 | Not Available | + | 1107718 - 1108689 | 36931.3 |
| hypothetical protein | N824_15905 | Not Available | + | 1108925 - 1110340 | 54389.6 |
| hypothetical protein | N824_15910 | Not Available | + | 1110762 - 1110977 | 8227.02 |
| hypothetical protein | N824_15915 | Not Available | - | 1111236 - 1112375 | 44455.4 |
| hypothetical protein | N824_15920 | Not Available | - | 1112445 - 1112813 | 13795.8 |
| hypothetical protein | N824_15925 | Not Available | - | 1112973 - 1114316 | 51820.5 |
| hypothetical protein | N824_15930 | Not Available | - | 1114747 - 1115163 | 15528.5 |
| hypothetical protein | N824_15935 | Not Available | - | 1115280 - 1115759 | 17965.0 |
| hypothetical protein | N824_15940 | Not Available | - | 1115761 - 1116528 | 27368.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.