Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15845 | Not Available | + | 1090418 - 1091698 | 48693.8 |
| hypothetical protein | N824_15850 | Not Available | + | 1091685 - 1092293 | 23397.8 |
| hypothetical protein | N824_15855 | Not Available | + | 1092308 - 1092916 | 23946.4 |
| hypothetical protein | N824_15860 | Not Available | + | 1093063 - 1093872 | 31637.1 |
| hypothetical protein | N824_15865 | Not Available | + | 1093878 - 1096397 | 93985.5 |
| hypothetical protein | N824_15870 | Not Available | + | 1096452 - 1097531 | 39958.0 |
| hypothetical protein | N824_15875 | Not Available | + | 1097603 - 1100734 | 118123.0 |
| hypothetical protein | N824_15880 | Not Available | + | 1100736 - 1103804 | 115057.0 |
| hypothetical protein | N824_15885 | Not Available | - | 1103823 - 1105340 | 58006.8 |
| hypothetical protein | N824_15890 | Not Available | - | 1105328 - 1106134 | 31041.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.