Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15795 | Not Available | + | 1083071 - 1083778 | 26220.6 |
| hypothetical protein | N824_15800 | Not Available | + | 1083809 - 1084462 | 24272.1 |
| sugar abc transporter atp-binding protein | N824_15805 | Not Available | + | 1084713 - 1085705 | 37195.9 |
| hypothetical protein | N824_15810 | Not Available | + | 1085975 - 1086775 | 31127.4 |
| hypothetical protein | N824_15815 | Not Available | + | 1086939 - 1087172 | 9072.77 |
| hypothetical protein | N824_15820 | Not Available | + | 1087266 - 1088108 | 32047.0 |
| hypothetical protein | N824_15825 | Not Available | + | 1088105 - 1088500 | 15288.9 |
| hypothetical protein | N824_15830 | Not Available | + | 1088516 - 1089565 | 39808.8 |
| hypothetical protein | N824_15835 | Not Available | + | 1089549 - 1089809 | 10383.7 |
| hypothetical protein | N824_15840 | Not Available | + | 1089894 - 1090376 | 16936.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.