Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15695 | Not Available | + | 1058962 - 1061148 | 75496.7 |
| hypothetical protein | N824_15700 | Not Available | + | 1061270 - 1061947 | 25351.8 |
| hypothetical protein | N824_15705 | Not Available | + | 1061871 - 1063100 | 45524.1 |
| hypothetical protein | N824_15710 | Not Available | + | 1063267 - 1066074 | 106494.0 |
| hypothetical protein | N824_15715 | Not Available | + | 1066122 - 1069232 | 113300.0 |
| hypothetical protein | N824_15720 | Not Available | + | 1069251 - 1070843 | 58890.6 |
| hypothetical protein | N824_15725 | Not Available | + | 1070830 - 1071783 | 34848.1 |
| hypothetical protein | N824_15730 | Not Available | + | 1071950 - 1072465 | 18492.3 |
| hypothetical protein | N824_15735 | Not Available | - | 1072524 - 1072757 | 8558.28 |
| hypothetical protein | N824_15740 | Not Available | - | 1072783 - 1073346 | 21289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.