Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15645 | Not Available | - | 1045075 - 1045827 | 26881.8 |
| hypothetical protein | N824_15650 | Not Available | - | 1045938 - 1046966 | 37933.8 |
| hypothetical protein | N824_15655 | Not Available | + | 1047028 - 1047183 | 6221.09 |
| hypothetical protein | N824_15660 | Not Available | + | 1047384 - 1050602 | 119739.0 |
| hypothetical protein | N824_15665 | Not Available | + | 1050668 - 1052437 | 66627.3 |
| hypothetical protein | N824_15670 | Not Available | + | 1052499 - 1053764 | 48119.2 |
| hypothetical protein | N824_15675 | Not Available | + | 1053764 - 1054630 | 32739.1 |
| oxidoreductase | N824_15680 | Not Available | + | 1054664 - 1056103 | 53146.0 |
| hypothetical protein | N824_15685 | Not Available | + | 1056100 - 1057464 | 51084.5 |
| hypothetical protein | N824_15690 | Not Available | + | 1057505 - 1058962 | 53240.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.