Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15595 | Not Available | - | 1036205 - 1038193 | 75829.9 |
| glucose-fructose oxidoreductase | N824_15600 | Not Available | + | 1038343 - 1039455 | 41022.0 |
| hypothetical protein | N824_15605 | Not Available | - | 1039475 - 1040050 | 21703.1 |
| hypothetical protein | N824_15610 | Not Available | + | 1040102 - 1040854 | 27529.5 |
| arsenic resistance protein arsb | N824_15615 | Not Available | - | 1040856 - 1041890 | 38094.3 |
| protein-tyrosine phosphatase | N824_15620 | Not Available | - | 1041890 - 1042303 | 15613.3 |
| hypothetical protein | N824_15625 | Not Available | - | 1042311 - 1042811 | 18670.3 |
| arsr family transcriptional regulator | N824_15630 | Not Available | - | 1042867 - 1043196 | 12059.8 |
| hypothetical protein | N824_15635 | Not Available | - | 1043634 - 1043882 | 9390.61 |
| hypothetical protein | N824_15640 | Not Available | - | 1043883 - 1045046 | 44051.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.